Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS38385.1 | flgB | MexAM1_META1p0442 | MexAM1_META1p0443 | Hypothetical protein; No homology to any previously reported sequences. | Flagellar basal-body rod protein flgB; Function of strongly homologous gene; structure. | 0.520 |
ACS38385.1 | flgC | MexAM1_META1p0442 | MexAM1_META1p0444 | Hypothetical protein; No homology to any previously reported sequences. | Flagellar biosynthesis; Function of strongly homologous gene; structure. | 0.520 |
ACS38385.1 | fliE | MexAM1_META1p0442 | MexAM1_META1p0445 | Hypothetical protein; No homology to any previously reported sequences. | Flagellar hook-basal body complex protein FliE; Function of strongly homologous gene; structure. | 0.500 |
flgB | ACS38385.1 | MexAM1_META1p0443 | MexAM1_META1p0442 | Flagellar basal-body rod protein flgB; Function of strongly homologous gene; structure. | Hypothetical protein; No homology to any previously reported sequences. | 0.520 |
flgB | flgC | MexAM1_META1p0443 | MexAM1_META1p0444 | Flagellar basal-body rod protein flgB; Function of strongly homologous gene; structure. | Flagellar biosynthesis; Function of strongly homologous gene; structure. | 0.992 |
flgB | fliE | MexAM1_META1p0443 | MexAM1_META1p0445 | Flagellar basal-body rod protein flgB; Function of strongly homologous gene; structure. | Flagellar hook-basal body complex protein FliE; Function of strongly homologous gene; structure. | 0.998 |
flgC | ACS38385.1 | MexAM1_META1p0444 | MexAM1_META1p0442 | Flagellar biosynthesis; Function of strongly homologous gene; structure. | Hypothetical protein; No homology to any previously reported sequences. | 0.520 |
flgC | flgB | MexAM1_META1p0444 | MexAM1_META1p0443 | Flagellar biosynthesis; Function of strongly homologous gene; structure. | Flagellar basal-body rod protein flgB; Function of strongly homologous gene; structure. | 0.992 |
flgC | fliE | MexAM1_META1p0444 | MexAM1_META1p0445 | Flagellar biosynthesis; Function of strongly homologous gene; structure. | Flagellar hook-basal body complex protein FliE; Function of strongly homologous gene; structure. | 0.988 |
fliE | ACS38385.1 | MexAM1_META1p0445 | MexAM1_META1p0442 | Flagellar hook-basal body complex protein FliE; Function of strongly homologous gene; structure. | Hypothetical protein; No homology to any previously reported sequences. | 0.500 |
fliE | flgB | MexAM1_META1p0445 | MexAM1_META1p0443 | Flagellar hook-basal body complex protein FliE; Function of strongly homologous gene; structure. | Flagellar basal-body rod protein flgB; Function of strongly homologous gene; structure. | 0.998 |
fliE | flgC | MexAM1_META1p0445 | MexAM1_META1p0444 | Flagellar hook-basal body complex protein FliE; Function of strongly homologous gene; structure. | Flagellar biosynthesis; Function of strongly homologous gene; structure. | 0.988 |