STRINGSTRING
ACS38423.1 ACS38423.1 ACS38422.1 ACS38422.1 ACS38424.1 ACS38424.1 ACS41925.1 ACS41925.1 ACS41855.1 ACS41855.1 trmD trmD bioB bioB ACS41259.1 ACS41259.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS38423.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (243 aa)    
Predicted Functional Partners:
ACS38422.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.578
ACS38424.1
Hypothetical protein; No homology to any previously reported sequences.
       0.541
ACS41925.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.516
ACS41855.1
Sulfite oxidase, oxidoreductase molybdopterin binding; Function of strongly homologous gene; enzyme.
  
     0.462
trmD
tRNA (guanine)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
     
 0.449
bioB
Biotin synthetase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.442
ACS41259.1
Sulfite oxidase, oxidoreductase molybdopterin binding; Function of strongly homologous gene; enzyme.
  
     0.440
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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