Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS38428.1 | mtnA | MexAM1_META1p0487 | MexAM1_META1p0488 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative translation initiation factor, aIF-2B alpha subunit (eIF-2B); Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | 0.481 |
ACS38428.1 | serA-2 | MexAM1_META1p0487 | MexAM1_META1p0486 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Phosphoglycerate dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.773 |
ACS38428.1 | serC | MexAM1_META1p0487 | MexAM1_META1p0485 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.470 |
mtnA | ACS38428.1 | MexAM1_META1p0488 | MexAM1_META1p0487 | Putative translation initiation factor, aIF-2B alpha subunit (eIF-2B); Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.481 |
mtnA | serA-2 | MexAM1_META1p0488 | MexAM1_META1p0486 | Putative translation initiation factor, aIF-2B alpha subunit (eIF-2B); Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | Phosphoglycerate dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.538 |
mtnA | serC | MexAM1_META1p0488 | MexAM1_META1p0485 | Putative translation initiation factor, aIF-2B alpha subunit (eIF-2B); Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.453 |
serA-2 | ACS38428.1 | MexAM1_META1p0486 | MexAM1_META1p0487 | Phosphoglycerate dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.773 |
serA-2 | mtnA | MexAM1_META1p0486 | MexAM1_META1p0488 | Phosphoglycerate dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Putative translation initiation factor, aIF-2B alpha subunit (eIF-2B); Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | 0.538 |
serA-2 | serC | MexAM1_META1p0486 | MexAM1_META1p0485 | Phosphoglycerate dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.999 |
serC | ACS38428.1 | MexAM1_META1p0485 | MexAM1_META1p0487 | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.470 |
serC | mtnA | MexAM1_META1p0485 | MexAM1_META1p0488 | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | Putative translation initiation factor, aIF-2B alpha subunit (eIF-2B); Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | 0.453 |
serC | serA-2 | MexAM1_META1p0485 | MexAM1_META1p0486 | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | Phosphoglycerate dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.999 |