STRINGSTRING
ACS38431.1 ACS38431.1 gapA gapA rpsA rpsA ACS38432.1 ACS38432.1 ACS39657.1 ACS39657.1 ACS39658.1 ACS39658.1 crtB crtB ACS42247.1 ACS42247.1 ACS38430.1 ACS38430.1 trmL trmL topA topA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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ACS38431.1Putative multidrug efflux system transporter mdtK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (472 aa)    
Predicted Functional Partners:
gapA
Glyceraldehyde-3-phosphate dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.790
rpsA
30S ribosomal subunit protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
  
    0.770
ACS38432.1
ABC transporter, fused ATPase and permease domains; Function of strongly homologous gene; transporter.
  
 
 0.713
ACS39657.1
Putative phytoene synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.698
ACS39658.1
Putative phytoene synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.698
crtB
Phytoene synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 
 0.698
ACS42247.1
Terpenoid synthase, putative phytoene synthase; Function of strongly homologous gene; enzyme.
   
 
 0.698
ACS38430.1
Putative DNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.584
trmL
Putative rRNA methylase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.
  
    0.524
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
     
 0.421
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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