STRINGSTRING
ACS38508.1 ACS38508.1 rpoA rpoA rpoB rpoB rpoZ rpoZ ACS40434.1 ACS40434.1 ACS38297.1 ACS38297.1 ACS38563.1 ACS38563.1 ACS38564.1 ACS38564.1 ACS39040.1 ACS39040.1 ACS39565.1 ACS39565.1 ACS39749.1 ACS39749.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ACS38508.1Transcriptional accessory protein; Function of strongly homologous gene; factor. (771 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.822
rpoB
RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.811
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
 0.770
ACS40434.1
Hypothetical protein; No homology to any previously reported sequences.
   
 0.538
ACS38297.1
Conserved hypothetical protein with putative exported protein, tetratricopeptide TPR_4 domain; Homologs of previously reported genes of unknown function.
    
 0.518
ACS38563.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
 0.518
ACS38564.1
Hypothetical protein; No homology to any previously reported sequences.
    
 0.518
ACS39040.1
Putative CelB-like protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
    
 0.518
ACS39565.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
    
 0.518
ACS39749.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
 0.518
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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