Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS38553.1 | bioF | MexAM1_META1p0623 | MexAM1_META1p0624 | Hypothetical protein; No homology to any previously reported sequences. | 7-keto-8-aminopelargonic acid synthetase (8-amino-7-oxononanoate synthase; Function of strongly homologous gene; enzyme. | 0.542 |
ACS38553.1 | gcvT | MexAM1_META1p0623 | MexAM1_META1p0622 | Hypothetical protein; No homology to any previously reported sequences. | Glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent; Function of strongly homologous gene; enzyme. | 0.404 |
bioF | ACS38553.1 | MexAM1_META1p0624 | MexAM1_META1p0623 | 7-keto-8-aminopelargonic acid synthetase (8-amino-7-oxononanoate synthase; Function of strongly homologous gene; enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.542 |
bioF | gcvT | MexAM1_META1p0624 | MexAM1_META1p0622 | 7-keto-8-aminopelargonic acid synthetase (8-amino-7-oxononanoate synthase; Function of strongly homologous gene; enzyme. | Glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent; Function of strongly homologous gene; enzyme. | 0.479 |
gcvT | ACS38553.1 | MexAM1_META1p0622 | MexAM1_META1p0623 | Glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent; Function of strongly homologous gene; enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.404 |
gcvT | bioF | MexAM1_META1p0622 | MexAM1_META1p0624 | Glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent; Function of strongly homologous gene; enzyme. | 7-keto-8-aminopelargonic acid synthetase (8-amino-7-oxononanoate synthase; Function of strongly homologous gene; enzyme. | 0.479 |