STRINGSTRING
hmp hmp ACS42316.1 ACS42316.1 ACS42543.1 ACS42543.1 ACS38671.1 ACS38671.1 ACS38822.1 ACS38822.1 ACS38680.1 ACS38680.1 ACS42548.1 ACS42548.1 fixL fixL fixL-2 fixL-2 ACS41470.1 ACS41470.1 ACS41120.1 ACS41120.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmpBifunctional: nitric oxide dioxygenase (N-terminal); Function of strongly homologous gene; enzyme; Belongs to the globin family. (414 aa)    
Predicted Functional Partners:
ACS42316.1
MOSC domain protein, YiiM-like protein; Homologs of previously reported genes of unknown function.
   
 0.925
ACS42543.1
Pyridoxamine 5'-phosphate oxidase-related; Function of strongly homologous gene; enzyme.
      0.916
ACS38671.1
Transcriptional regulator, rrf2 family; Function of strongly homologous gene; regulator.
 
   
 0.842
ACS38822.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase:Rubredoxin-type Fe(Cys)4 protein; Function of strongly homologous gene; enzyme.
  
  
 0.811
ACS38680.1
Putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.685
ACS42548.1
Putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.685
fixL
Two component low oxygen sensor histidine kinase with PAS domains, FixL; Function of strongly homologous gene; enzyme.
     
 0.682
fixL-2
Two component low oxygen sensor histidine kinase with PAS domains; Function of strongly homologous gene; enzyme.
     
 0.682
ACS41470.1
Transcriptional regulator, rrf2 family; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
   
 0.667
ACS41120.1
Putative transcriptional regulator, Rrf2 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
   
 0.636
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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