Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS38673.1 | ACS38674.1 | MexAM1_META1p0747 | MexAM1_META1p0748 | Hypothetical protein; Doubtful CDS. | Hypothetical protein; No homology to any previously reported sequences. | 0.482 |
ACS38673.1 | ACS38675.1 | MexAM1_META1p0747 | MexAM1_META1p0750 | Hypothetical protein; Doubtful CDS. | Hypothetical protein; No homology to any previously reported sequences. | 0.482 |
ACS38674.1 | ACS38673.1 | MexAM1_META1p0748 | MexAM1_META1p0747 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; Doubtful CDS. | 0.482 |
ACS38674.1 | ACS38675.1 | MexAM1_META1p0748 | MexAM1_META1p0750 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.800 |
ACS38674.1 | cysK | MexAM1_META1p0748 | MexAM1_META1p0751 | Hypothetical protein; No homology to any previously reported sequences. | Subunit of cysteine synthase A and O-acetylserine sulfhydrolase A, PLP-dependent enzyme; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.539 |
ACS38675.1 | ACS38673.1 | MexAM1_META1p0750 | MexAM1_META1p0747 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; Doubtful CDS. | 0.482 |
ACS38675.1 | ACS38674.1 | MexAM1_META1p0750 | MexAM1_META1p0748 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.800 |
ACS38675.1 | cysK | MexAM1_META1p0750 | MexAM1_META1p0751 | Hypothetical protein; No homology to any previously reported sequences. | Subunit of cysteine synthase A and O-acetylserine sulfhydrolase A, PLP-dependent enzyme; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.539 |
cysK | ACS38674.1 | MexAM1_META1p0751 | MexAM1_META1p0748 | Subunit of cysteine synthase A and O-acetylserine sulfhydrolase A, PLP-dependent enzyme; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.539 |
cysK | ACS38675.1 | MexAM1_META1p0751 | MexAM1_META1p0750 | Subunit of cysteine synthase A and O-acetylserine sulfhydrolase A, PLP-dependent enzyme; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.539 |