Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS38708.1 | ACS38725.1 | MexAM1_META1p0782 | MexAM1_META1p0802 | Putative Acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative transcriptional regulator (LysR family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. | 0.466 |
ACS38708.1 | ACS39021.1 | MexAM1_META1p0782 | MexAM1_META1p1149 | Putative Acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.454 |
ACS38708.1 | ACS40785.1 | MexAM1_META1p0782 | MexAM1_META1p3037 | Putative Acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.540 |
ACS38708.1 | rluD | MexAM1_META1p0782 | MexAM1_META1p0783 | Putative Acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Ribosomal large subunit pseudouridine synthase D (Pseudouridylate synthase) (Uracil hydrolyase); Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.439 |
ACS38725.1 | ACS38708.1 | MexAM1_META1p0802 | MexAM1_META1p0782 | Putative transcriptional regulator (LysR family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. | Putative Acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.466 |
ACS38725.1 | ACS40785.1 | MexAM1_META1p0802 | MexAM1_META1p3037 | Putative transcriptional regulator (LysR family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein; No homology to any previously reported sequences. | 0.441 |
ACS39021.1 | ACS38708.1 | MexAM1_META1p1149 | MexAM1_META1p0782 | Putative peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative Acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.454 |
ACS40785.1 | ACS38708.1 | MexAM1_META1p3037 | MexAM1_META1p0782 | Hypothetical protein; No homology to any previously reported sequences. | Putative Acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.540 |
ACS40785.1 | ACS38725.1 | MexAM1_META1p3037 | MexAM1_META1p0802 | Hypothetical protein; No homology to any previously reported sequences. | Putative transcriptional regulator (LysR family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. | 0.441 |
rluD | ACS38708.1 | MexAM1_META1p0783 | MexAM1_META1p0782 | Ribosomal large subunit pseudouridine synthase D (Pseudouridylate synthase) (Uracil hydrolyase); Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Putative Acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.439 |