STRINGSTRING
ACS38811.1 ACS38811.1 ppk ppk ppa ppa ACS39524.1 ACS39524.1 ACS42447.1 ACS42447.1 acrF acrF ACS38813.1 ACS38813.1 ACS39852.1 ACS39852.1 yggW yggW ACS38110.1 ACS38110.1 ACS40197.1 ACS40197.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ACS38811.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (280 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase, component of RNA degradosome; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.976
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
    
 0.919
ACS39524.1
Putative outer membrane protein, OmpW family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
   
    0.768
ACS42447.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
    0.767
acrF
Multidrug transport protein, acriflavin resistance protein F (RND family); Function of strongly homologous gene; transporter.
       0.660
ACS38813.1
Putative RND efflux transporter, membrane fusion protein subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.660
ACS39852.1
Exopolyphosphatase; Function of strongly homologous gene; enzyme.
 
  
 0.584
yggW
Putative oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.569
ACS38110.1
Radical SAM domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.548
ACS40197.1
Hypothetical protein; No homology to any previously reported sequences.
   
    0.548
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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