Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACS38897.1 | ACS38898.1 | MexAM1_META1p1002 | MexAM1_META1p1003 | Putative GTPase, putative cobalamin biosynthesis protein (CobW-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Serine-type D-alanyl-D-alanine carboxypeptidase precursor; Function of strongly homologous gene; enzyme; Belongs to the peptidase S11 family. | 0.545 |
| ACS38897.1 | ACS39802.1 | MexAM1_META1p1002 | MexAM1_META1p1995 | Putative GTPase, putative cobalamin biosynthesis protein (CobW-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.400 |
| ACS38897.1 | ACS40122.1 | MexAM1_META1p1002 | MexAM1_META1p2339 | Putative GTPase, putative cobalamin biosynthesis protein (CobW-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | WD-40 repeat family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.454 |
| ACS38897.1 | ACS40828.1 | MexAM1_META1p1002 | MexAM1_META1p3080 | Putative GTPase, putative cobalamin biosynthesis protein (CobW-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative ABC transporter, periplasmic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the bacterial solute-binding protein 9 family. | 0.629 |
| ACS38897.1 | cobL | MexAM1_META1p1002 | MexAM1_META1p0799 | Putative GTPase, putative cobalamin biosynthesis protein (CobW-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Precorrin-6Y C5,15-methyltransferase (decarboxylating); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.461 |
| ACS38897.1 | dksA | MexAM1_META1p1002 | MexAM1_META1p3246 | Putative GTPase, putative cobalamin biosynthesis protein (CobW-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | DnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. | 0.613 |
| ACS38897.1 | rpmB | MexAM1_META1p1002 | MexAM1_META1p3182 | Putative GTPase, putative cobalamin biosynthesis protein (CobW-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 50S ribosomal protein L28; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL28 family. | 0.592 |
| ACS38897.1 | rpmG | MexAM1_META1p1002 | MexAM1_META1p1700 | Putative GTPase, putative cobalamin biosynthesis protein (CobW-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 50S ribosomal subunit protein L33; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL33 family. | 0.429 |
| ACS38897.1 | rpsN | MexAM1_META1p1002 | MexAM1_META1p2179 | Putative GTPase, putative cobalamin biosynthesis protein (CobW-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 30S ribosomal subunit protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.713 |
| ACS38898.1 | ACS38897.1 | MexAM1_META1p1003 | MexAM1_META1p1002 | Serine-type D-alanyl-D-alanine carboxypeptidase precursor; Function of strongly homologous gene; enzyme; Belongs to the peptidase S11 family. | Putative GTPase, putative cobalamin biosynthesis protein (CobW-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.545 |
| ACS39802.1 | ACS38897.1 | MexAM1_META1p1995 | MexAM1_META1p1002 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative GTPase, putative cobalamin biosynthesis protein (CobW-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.400 |
| ACS40122.1 | ACS38897.1 | MexAM1_META1p2339 | MexAM1_META1p1002 | WD-40 repeat family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative GTPase, putative cobalamin biosynthesis protein (CobW-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.454 |
| ACS40828.1 | ACS38897.1 | MexAM1_META1p3080 | MexAM1_META1p1002 | Putative ABC transporter, periplasmic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the bacterial solute-binding protein 9 family. | Putative GTPase, putative cobalamin biosynthesis protein (CobW-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.629 |
| ACS40828.1 | rpmB | MexAM1_META1p3080 | MexAM1_META1p3182 | Putative ABC transporter, periplasmic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the bacterial solute-binding protein 9 family. | 50S ribosomal protein L28; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL28 family. | 0.815 |
| ACS40828.1 | rpsN | MexAM1_META1p3080 | MexAM1_META1p2179 | Putative ABC transporter, periplasmic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the bacterial solute-binding protein 9 family. | 30S ribosomal subunit protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.815 |
| cobL | ACS38897.1 | MexAM1_META1p0799 | MexAM1_META1p1002 | Precorrin-6Y C5,15-methyltransferase (decarboxylating); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Putative GTPase, putative cobalamin biosynthesis protein (CobW-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.461 |
| dksA | ACS38897.1 | MexAM1_META1p3246 | MexAM1_META1p1002 | DnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. | Putative GTPase, putative cobalamin biosynthesis protein (CobW-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.613 |
| rpmB | ACS38897.1 | MexAM1_META1p3182 | MexAM1_META1p1002 | 50S ribosomal protein L28; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL28 family. | Putative GTPase, putative cobalamin biosynthesis protein (CobW-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.592 |
| rpmB | ACS40828.1 | MexAM1_META1p3182 | MexAM1_META1p3080 | 50S ribosomal protein L28; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL28 family. | Putative ABC transporter, periplasmic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the bacterial solute-binding protein 9 family. | 0.815 |
| rpmB | rpmG | MexAM1_META1p3182 | MexAM1_META1p1700 | 50S ribosomal protein L28; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL28 family. | 50S ribosomal subunit protein L33; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL33 family. | 0.988 |
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