STRINGSTRING
ACS38898.1 ACS38898.1 ftsI ftsI ACS39790.1 ACS39790.1 ACS40948.1 ACS40948.1 ACS40833.1 ACS40833.1 ACS40591.1 ACS40591.1 ACS41280.1 ACS41280.1 ACS40305.1 ACS40305.1 ACS40846.1 ACS40846.1 ACS39067.1 ACS39067.1 pbpC-2 pbpC-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ACS38898.1Serine-type D-alanyl-D-alanine carboxypeptidase precursor; Function of strongly homologous gene; enzyme; Belongs to the peptidase S11 family. (501 aa)    
Predicted Functional Partners:
ftsI
Peptidoglycan glycosyltransferase (penicillin-binding protein); Function of strongly homologous gene; enzyme.
 
 
 0.719
ACS39790.1
Conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family; Homologs of previously reported genes of unknown function.
 
  
 0.633
ACS40948.1
Conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein; Homologs of previously reported genes of unknown function.
 
  
 0.630
ACS40833.1
Conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein; Homologs of previously reported genes of unknown function.
 
  
 0.629
ACS40591.1
Conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein; Homologs of previously reported genes of unknown function.
 
  
 0.627
ACS41280.1
Conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein precursor; Homologs of previously reported genes of unknown function.
 
  
 0.626
ACS40305.1
Conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein; Homologs of previously reported genes of unknown function.
 
  
 0.625
ACS40846.1
Conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein; Homologs of previously reported genes of unknown function.
 
  
 0.618
ACS39067.1
Conserved hypothetical protein precursor, ErfK/YbiS/YcfS/YnhG family protein; Homologs of previously reported genes of unknown function.
 
  
 0.606
pbpC-2
Penicillin-binding protein; Function of strongly homologous gene; enzyme.
  
 
 0.597
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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