Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS38974.1 | ACS38975.1 | MexAM1_META1p1091 | MexAM1_META1p1092 | ADP-ribosyl glycohydrolase family protein (fragment); Gene remnant; putative enzyme. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.586 |
ACS38974.1 | ACS39184.1 | MexAM1_META1p1091 | MexAM1_META1p1320 | ADP-ribosyl glycohydrolase family protein (fragment); Gene remnant; putative enzyme. | Phage portal protein, HK97; Function of strongly homologous gene; extrachromosomal origin. | 0.703 |
ACS38974.1 | ACS39266.1 | MexAM1_META1p1091 | MexAM1_META1p1404 | ADP-ribosyl glycohydrolase family protein (fragment); Gene remnant; putative enzyme. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.424 |
ACS38974.1 | ACS39269.1 | MexAM1_META1p1091 | MexAM1_META1p1407 | ADP-ribosyl glycohydrolase family protein (fragment); Gene remnant; putative enzyme. | Conserved hypothetical protein, putative zinc ion binding protein; Homologs of previously reported genes of unknown function. | 0.426 |
ACS38974.1 | ACS40759.1 | MexAM1_META1p1091 | MexAM1_META1p3011 | ADP-ribosyl glycohydrolase family protein (fragment); Gene remnant; putative enzyme. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.403 |
ACS38974.1 | glnB | MexAM1_META1p1091 | MexAM1_META1p2376 | ADP-ribosyl glycohydrolase family protein (fragment); Gene remnant; putative enzyme. | Regulatory protein (P-II) for nitrogen assimilation by glutamine synthetase (ATase); Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the P(II) protein family. | 0.728 |
ACS38974.1 | glnK | MexAM1_META1p1091 | MexAM1_META1p2087 | ADP-ribosyl glycohydrolase family protein (fragment); Gene remnant; putative enzyme. | Nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB; Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the P(II) protein family. | 0.728 |
ACS38975.1 | ACS38974.1 | MexAM1_META1p1092 | MexAM1_META1p1091 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | ADP-ribosyl glycohydrolase family protein (fragment); Gene remnant; putative enzyme. | 0.586 |
ACS39184.1 | ACS38974.1 | MexAM1_META1p1320 | MexAM1_META1p1091 | Phage portal protein, HK97; Function of strongly homologous gene; extrachromosomal origin. | ADP-ribosyl glycohydrolase family protein (fragment); Gene remnant; putative enzyme. | 0.703 |
ACS39266.1 | ACS38974.1 | MexAM1_META1p1404 | MexAM1_META1p1091 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | ADP-ribosyl glycohydrolase family protein (fragment); Gene remnant; putative enzyme. | 0.424 |
ACS39266.1 | ACS39269.1 | MexAM1_META1p1404 | MexAM1_META1p1407 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein, putative zinc ion binding protein; Homologs of previously reported genes of unknown function. | 0.953 |
ACS39269.1 | ACS38974.1 | MexAM1_META1p1407 | MexAM1_META1p1091 | Conserved hypothetical protein, putative zinc ion binding protein; Homologs of previously reported genes of unknown function. | ADP-ribosyl glycohydrolase family protein (fragment); Gene remnant; putative enzyme. | 0.426 |
ACS39269.1 | ACS39266.1 | MexAM1_META1p1407 | MexAM1_META1p1404 | Conserved hypothetical protein, putative zinc ion binding protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.953 |
ACS40759.1 | ACS38974.1 | MexAM1_META1p3011 | MexAM1_META1p1091 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | ADP-ribosyl glycohydrolase family protein (fragment); Gene remnant; putative enzyme. | 0.403 |
glnB | ACS38974.1 | MexAM1_META1p2376 | MexAM1_META1p1091 | Regulatory protein (P-II) for nitrogen assimilation by glutamine synthetase (ATase); Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the P(II) protein family. | ADP-ribosyl glycohydrolase family protein (fragment); Gene remnant; putative enzyme. | 0.728 |
glnK | ACS38974.1 | MexAM1_META1p2087 | MexAM1_META1p1091 | Nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB; Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the P(II) protein family. | ADP-ribosyl glycohydrolase family protein (fragment); Gene remnant; putative enzyme. | 0.728 |