STRINGSTRING
pbpC pbpC ACS39146.1 ACS39146.1 ACS38898.1 ACS38898.1 ACS40870.1 ACS40870.1 ACS42859.1 ACS42859.1 pncA pncA sugE sugE ACS39145.1 ACS39145.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbpCPenicillin binding protein; Function of strongly homologous gene; enzyme. (733 aa)    
Predicted Functional Partners:
ACS39146.1
Conserved hypothetical protein (large extracellular alpha-helical protein); Homologs of previously reported genes of unknown function.
   
 0.967
ACS38898.1
Serine-type D-alanyl-D-alanine carboxypeptidase precursor; Function of strongly homologous gene; enzyme; Belongs to the peptidase S11 family.
     
 0.509
ACS40870.1
Putative penicillin binding protein, beta-lactamase/transpeptidase-like superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase S11 family.
     
 0.509
ACS42859.1
Putative D-alanyl-D-alanine carboxypeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase S11 family.
     
 0.509
pncA
Nicotinamidase; Function of strongly homologous gene; enzyme.
   
    0.503
sugE
Multidrug efflux system protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
       0.486
ACS39145.1
Conserved hypothetical protein precursor; Homologs of previously reported genes of unknown function.
       0.407
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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