Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS38067.1 | ACS39209.1 | MexAM1_META1p0100 | MexAM1_META1p1347 | Putative transcriptional regulator, AraC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative transcriptional regulator (AraC family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 0.573 |
ACS38826.1 | ACS39209.1 | MexAM1_META1p0925 | MexAM1_META1p1347 | Putative bifunctional protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative transcriptional regulator (AraC family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 0.468 |
ACS39208.1 | ACS39209.1 | MexAM1_META1p1346 | MexAM1_META1p1347 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative transcriptional regulator (AraC family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 0.824 |
ACS39209.1 | ACS38067.1 | MexAM1_META1p1347 | MexAM1_META1p0100 | Putative transcriptional regulator (AraC family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | Putative transcriptional regulator, AraC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.573 |
ACS39209.1 | ACS38826.1 | MexAM1_META1p1347 | MexAM1_META1p0925 | Putative transcriptional regulator (AraC family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | Putative bifunctional protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.468 |
ACS39209.1 | ACS39208.1 | MexAM1_META1p1347 | MexAM1_META1p1346 | Putative transcriptional regulator (AraC family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.824 |
ACS39209.1 | ada | MexAM1_META1p1347 | MexAM1_META1p4715 | Putative transcriptional regulator (AraC family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | Fused DNA-binding transcriptional dual regulator; Function of homologous gene experimentally demonstrated in an other organism; regulator. | 0.410 |
ACS39209.1 | rpoA | MexAM1_META1p1347 | MexAM1_META1p2167 | Putative transcriptional regulator (AraC family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.501 |
ada | ACS39209.1 | MexAM1_META1p4715 | MexAM1_META1p1347 | Fused DNA-binding transcriptional dual regulator; Function of homologous gene experimentally demonstrated in an other organism; regulator. | Putative transcriptional regulator (AraC family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 0.410 |
rpoA | ACS39209.1 | MexAM1_META1p2167 | MexAM1_META1p1347 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Putative transcriptional regulator (AraC family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 0.501 |