Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS39220.1 | atpC | MexAM1_META1p1358 | MexAM1_META1p1357 | Hypothetical protein; No homology to any previously reported sequences. | ATP synthase F1 sector epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.693 |
ACS39220.1 | atpD | MexAM1_META1p1358 | MexAM1_META1p1359 | Hypothetical protein; No homology to any previously reported sequences. | ATP synthase F1 sector subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.500 |
ACS39220.1 | atpG | MexAM1_META1p1358 | MexAM1_META1p1360 | Hypothetical protein; No homology to any previously reported sequences. | ATP synthase F1 sector gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.459 |
atpC | ACS39220.1 | MexAM1_META1p1357 | MexAM1_META1p1358 | ATP synthase F1 sector epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Hypothetical protein; No homology to any previously reported sequences. | 0.693 |
atpC | atpD | MexAM1_META1p1357 | MexAM1_META1p1359 | ATP synthase F1 sector epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP synthase F1 sector subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.999 |
atpC | atpG | MexAM1_META1p1357 | MexAM1_META1p1360 | ATP synthase F1 sector epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP synthase F1 sector gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
atpD | ACS39220.1 | MexAM1_META1p1359 | MexAM1_META1p1358 | ATP synthase F1 sector subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | Hypothetical protein; No homology to any previously reported sequences. | 0.500 |
atpD | atpC | MexAM1_META1p1359 | MexAM1_META1p1357 | ATP synthase F1 sector subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | ATP synthase F1 sector epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
atpD | atpG | MexAM1_META1p1359 | MexAM1_META1p1360 | ATP synthase F1 sector subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | ATP synthase F1 sector gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
atpG | ACS39220.1 | MexAM1_META1p1360 | MexAM1_META1p1358 | ATP synthase F1 sector gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | Hypothetical protein; No homology to any previously reported sequences. | 0.459 |
atpG | atpC | MexAM1_META1p1360 | MexAM1_META1p1357 | ATP synthase F1 sector gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | ATP synthase F1 sector epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
atpG | atpD | MexAM1_META1p1360 | MexAM1_META1p1359 | ATP synthase F1 sector gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | ATP synthase F1 sector subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.999 |