Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS39236.1 | ACS39237.1 | MexAM1_META1p1374 | MexAM1_META1p1375 | Conserved hypothetical protein with 4'-phosphopantetheinyl transferase domain; Homologs of previously reported genes of unknown function; Belongs to the P-Pant transferase superfamily. | Putative hydrolase, Nudix domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.773 |
ACS39236.1 | ampC | MexAM1_META1p1374 | MexAM1_META1p1373 | Conserved hypothetical protein with 4'-phosphopantetheinyl transferase domain; Homologs of previously reported genes of unknown function; Belongs to the P-Pant transferase superfamily. | beta-lactamase/D-ala carboxypeptidase; Function of strongly homologous gene; enzyme. | 0.520 |
ACS39237.1 | ACS39236.1 | MexAM1_META1p1375 | MexAM1_META1p1374 | Putative hydrolase, Nudix domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Conserved hypothetical protein with 4'-phosphopantetheinyl transferase domain; Homologs of previously reported genes of unknown function; Belongs to the P-Pant transferase superfamily. | 0.773 |
ACS39237.1 | ACS42929.1 | MexAM1_META1p1375 | MexAM1_META1p5328 | Putative hydrolase, Nudix domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Conserved hypothetical protein with putative Cytochrome c domain; Homologs of previously reported genes of unknown function. | 0.411 |
ACS39237.1 | ampC | MexAM1_META1p1375 | MexAM1_META1p1373 | Putative hydrolase, Nudix domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | beta-lactamase/D-ala carboxypeptidase; Function of strongly homologous gene; enzyme. | 0.520 |
ACS42929.1 | ACS39237.1 | MexAM1_META1p5328 | MexAM1_META1p1375 | Conserved hypothetical protein with putative Cytochrome c domain; Homologs of previously reported genes of unknown function. | Putative hydrolase, Nudix domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.411 |
ampC | ACS39236.1 | MexAM1_META1p1373 | MexAM1_META1p1374 | beta-lactamase/D-ala carboxypeptidase; Function of strongly homologous gene; enzyme. | Conserved hypothetical protein with 4'-phosphopantetheinyl transferase domain; Homologs of previously reported genes of unknown function; Belongs to the P-Pant transferase superfamily. | 0.520 |
ampC | ACS39237.1 | MexAM1_META1p1373 | MexAM1_META1p1375 | beta-lactamase/D-ala carboxypeptidase; Function of strongly homologous gene; enzyme. | Putative hydrolase, Nudix domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.520 |