Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS39310.1 | ACS39311.1 | MexAM1_META1p1448 | MexAM1_META1p1449 | Hypothetical protein; No homology to any previously reported sequences. | Putative transporter, major facilitator family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.581 |
ACS39310.1 | csaA | MexAM1_META1p1448 | MexAM1_META1p1447 | Hypothetical protein; No homology to any previously reported sequences. | Secretion chaperone protein; Function of homologous gene experimentally demonstrated in an other organism; factor. | 0.531 |
ACS39311.1 | ACS39310.1 | MexAM1_META1p1449 | MexAM1_META1p1448 | Putative transporter, major facilitator family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Hypothetical protein; No homology to any previously reported sequences. | 0.581 |
ACS39311.1 | csaA | MexAM1_META1p1449 | MexAM1_META1p1447 | Putative transporter, major facilitator family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Secretion chaperone protein; Function of homologous gene experimentally demonstrated in an other organism; factor. | 0.412 |
ACS39311.1 | secB | MexAM1_META1p1449 | MexAM1_META1p1450 | Putative transporter, major facilitator family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | 0.409 |
csaA | ACS39310.1 | MexAM1_META1p1447 | MexAM1_META1p1448 | Secretion chaperone protein; Function of homologous gene experimentally demonstrated in an other organism; factor. | Hypothetical protein; No homology to any previously reported sequences. | 0.531 |
csaA | ACS39311.1 | MexAM1_META1p1447 | MexAM1_META1p1449 | Secretion chaperone protein; Function of homologous gene experimentally demonstrated in an other organism; factor. | Putative transporter, major facilitator family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.412 |
secB | ACS39311.1 | MexAM1_META1p1450 | MexAM1_META1p1449 | Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | Putative transporter, major facilitator family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.409 |