Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS39346.1 | ACS39347.1 | MexAM1_META1p1484 | MexAM1_META1p1485 | Hypothetical protein; No homology to any previously reported sequences. | Putative cyclohexadienyl dehydrogenase (tyrC-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.732 |
ACS39346.1 | ACS39349.1 | MexAM1_META1p1484 | MexAM1_META1p1487 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.417 |
ACS39346.1 | hisC | MexAM1_META1p1484 | MexAM1_META1p1486 | Hypothetical protein; No homology to any previously reported sequences. | Histidinol-phosphate aminotransferase; Function of strongly homologous gene; enzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.732 |
ACS39347.1 | ACS39346.1 | MexAM1_META1p1485 | MexAM1_META1p1484 | Putative cyclohexadienyl dehydrogenase (tyrC-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.732 |
ACS39347.1 | ACS39349.1 | MexAM1_META1p1485 | MexAM1_META1p1487 | Putative cyclohexadienyl dehydrogenase (tyrC-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.437 |
ACS39347.1 | hisC | MexAM1_META1p1485 | MexAM1_META1p1486 | Putative cyclohexadienyl dehydrogenase (tyrC-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Histidinol-phosphate aminotransferase; Function of strongly homologous gene; enzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.998 |
ACS39349.1 | ACS39346.1 | MexAM1_META1p1487 | MexAM1_META1p1484 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.417 |
ACS39349.1 | ACS39347.1 | MexAM1_META1p1487 | MexAM1_META1p1485 | Hypothetical protein; No homology to any previously reported sequences. | Putative cyclohexadienyl dehydrogenase (tyrC-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.437 |
ACS39349.1 | ACS39350.1 | MexAM1_META1p1487 | MexAM1_META1p1488 | Hypothetical protein; No homology to any previously reported sequences. | Putative TonB-dependent siderophore receptor (putative ferrichrome outer membrane transporter); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. | 0.480 |
ACS39349.1 | hisC | MexAM1_META1p1487 | MexAM1_META1p1486 | Hypothetical protein; No homology to any previously reported sequences. | Histidinol-phosphate aminotransferase; Function of strongly homologous gene; enzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.437 |
ACS39350.1 | ACS39349.1 | MexAM1_META1p1488 | MexAM1_META1p1487 | Putative TonB-dependent siderophore receptor (putative ferrichrome outer membrane transporter); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. | Hypothetical protein; No homology to any previously reported sequences. | 0.480 |
hisC | ACS39346.1 | MexAM1_META1p1486 | MexAM1_META1p1484 | Histidinol-phosphate aminotransferase; Function of strongly homologous gene; enzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Hypothetical protein; No homology to any previously reported sequences. | 0.732 |
hisC | ACS39347.1 | MexAM1_META1p1486 | MexAM1_META1p1485 | Histidinol-phosphate aminotransferase; Function of strongly homologous gene; enzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Putative cyclohexadienyl dehydrogenase (tyrC-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.998 |
hisC | ACS39349.1 | MexAM1_META1p1486 | MexAM1_META1p1487 | Histidinol-phosphate aminotransferase; Function of strongly homologous gene; enzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Hypothetical protein; No homology to any previously reported sequences. | 0.437 |