STRINGSTRING
exbD exbD ACS39374.1 ACS39374.1 tolQ tolQ ACS39372.1 ACS39372.1 tolA tolA ACS38697.1 ACS38697.1 omp omp tolB tolB bamA bamA cobW cobW ACS40244.1 ACS40244.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
exbDUptake of enterobactin; Function of strongly homologous gene; membrane component. (153 aa)    
Predicted Functional Partners:
ACS39374.1
Membrane spanning protein in TonB-ExbB-ExbD complex; Function of strongly homologous gene; membrane component.
 
 
 0.993
tolQ
Membrane spanning protein in TolA-TolQ-TolR complex; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.984
ACS39372.1
Putative TonB family C-terminal domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 
 0.976
tolA
Colicin import membrane protein; Function of strongly homologous gene; membrane component.
  
 
 0.934
ACS38697.1
TonB family protein precursor.
  
 
 0.882
omp
Outer membrane lipoprotein omp16 precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 
 0.782
tolB
Protein tolB precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
  
 0.735
bamA
Putative outer membrane protein assembly factor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.698
cobW
Cobalamin biosynthesis protein CobW; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
      
 0.660
ACS40244.1
Putative ABC transporter, ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
   
 0.627
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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