STRINGSTRING
ACS39411.1 ACS39411.1 soxB soxB ACS39408.1 ACS39408.1 soxD soxD inh-3 inh-3 inh inh soxA-2 soxA-2 inh-2 inh-2 soxG soxG soxD-2 soxD-2 soxB-3 soxB-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ACS39411.1Transcriptional regulator, AraC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (332 aa)    
Predicted Functional Partners:
soxB
Sarcosine oxidase beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.714
ACS39408.1
Putative Sarcosine oxidase alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.688
soxD
Sarcosine oxidase, delta subunit; Function of strongly homologous gene; enzyme.
 
    0.628
inh-3
Isonitrile hydratase precursor, ThiJ/PfpI family protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.602
inh
Isonitrile hydratase, ThiJ/PfpI family protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.596
soxA-2
Sarcosine oxidase, alpha subunit; Function of strongly homologous gene; enzyme.
 
     0.580
inh-2
Isonitrile hydratase, ThiJ/PfpI family protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.576
soxG
Sarcosine oxidase, gamma subunit; Function of strongly homologous gene; enzyme.
 
    0.566
soxD-2
Sarcosine oxidase, delta subunit; Function of strongly homologous gene; enzyme.
 
    0.534
soxB-3
Sarcosine oxidase, beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
     0.470
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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