STRINGSTRING
yejF yejF yejE yejE ACS41779.1 ACS41779.1 ACS42298.1 ACS42298.1 oppB oppB ACS41780.1 ACS41780.1 ACS38199.1 ACS38199.1 deoB deoB ACS38197.1 ACS38197.1 ACS38198.1 ACS38198.1 ACS42296.1 ACS42296.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
yejFOligopeptide transport protein (ABC superfamily, atp_bind); Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily. (542 aa)    
Predicted Functional Partners:
yejE
Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.983
ACS41779.1
Putative Oligopeptide/dipeptide ABC transporter, membrane component (ddpC-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.983
ACS42298.1
Oligopeptide transport system permease protein; Function of strongly homologous gene; carrier.
  
 0.983
oppB
Oligopeptide transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 0.944
ACS41780.1
Putative Oligopeptide/dipeptide ABC transporter, membrane component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.919
ACS38199.1
Putative ABC transporter, permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.862
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
       0.800
ACS38197.1
Putative ABC transporter, periplasmic protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.791
ACS38198.1
Putative ABC transporter, periplasmic protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.786
ACS42296.1
Putative ABC transporter protein, periplasmic substrate-binding component (tat pathway signal); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.705
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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