STRINGSTRING
copB copB copA copA ACS40199.1 ACS40199.1 ACS39622.1 ACS39622.1 ACS39725.1 ACS39725.1 dnaG dnaG flgC flgC flgG flgG ACS41486.1 ACS41486.1 ilvD-2 ilvD-2 ilvD ilvD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
copBCopper resistance protein CopB precursor; Function of strongly homologous gene; transporter. (281 aa)    
Predicted Functional Partners:
copA
Copper resistance protein A precursor; Function of strongly homologous gene; enzyme.
  
 0.991
ACS40199.1
Putative multicopper oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.879
ACS39622.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.821
ACS39725.1
Multicopper oxidase, putative manganese-oxidizing multicopper oxidase; Function of strongly homologous gene; enzyme.
 
  
 0.792
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.
      
 0.612
flgC
Flagellar biosynthesis; Function of strongly homologous gene; structure.
      
 0.501
flgG
Flagellar biosynthesis; Function of strongly homologous gene; structure; Belongs to the flagella basal body rod proteins family.
      
 0.501
ACS41486.1
Conserved hypothetical protein with putative membrane protein; Homologs of previously reported genes of unknown function; putative membrane component.
 
     0.472
ilvD-2
Putative dihydroxyacid dehydratase (ilvD-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the IlvD/Edd family.
      
 0.449
ilvD
Dihydroxyacid dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the IlvD/Edd family.
      
 0.449
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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