STRINGSTRING
ACS39709.1 ACS39709.1 ACS39430.1 ACS39430.1 ACS40365.1 ACS40365.1 ACS39710.1 ACS39710.1 ACS42492.1 ACS42492.1 dnaN dnaN recQ recQ polA polA ACS39711.1 ACS39711.1 ACS39712.1 ACS39712.1 ACS39713.1 ACS39713.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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[Homology]
Score
ACS39709.1Hypothetical protein; No homology to any previously reported sequences. (235 aa)    
Predicted Functional Partners:
ACS39430.1
Putative ATP-dependent exodeoxyribonuclease (Subunit A)/helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the helicase family. UvrD subfamily.
 
 
 0.787
ACS40365.1
UvrD/REP helicase; Function of strongly homologous gene; enzyme; Belongs to the helicase family. UvrD subfamily.
 
 
 0.787
ACS39710.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
ACS42492.1
Putative helicase-exonuclease type V protein family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the helicase family. UvrD subfamily.
  
 
 0.755
dnaN
DNA polymerase III, beta-subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.738
recQ
ATP-dependent DNA helicase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.603
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 
 0.495
ACS39711.1
Hypothetical protein; No homology to any previously reported sequences.
       0.491
ACS39712.1
Hypothetical protein; No homology to any previously reported sequences.
       0.491
ACS39713.1
Hypothetical protein; No homology to any previously reported sequences.
       0.491
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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