STRINGSTRING
hss hss ACS39829.1 ACS39829.1 ACS38784.1 ACS38784.1 ACS39590.1 ACS39590.1 ACS39591.1 ACS39591.1 ACS39613.1 ACS39613.1 ACS40142.1 ACS40142.1 pepA pepA ACS39825.1 ACS39825.1 ACS42693.1 ACS42693.1 ACS42503.1 ACS42503.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hssHomospermidine synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (482 aa)    
Predicted Functional Partners:
ACS39829.1
Putative ornithine/diaminopimelate PLP-dependent decarboxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
     0.748
ACS38784.1
Putative transcriptional regulator, LysR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family.
      
 0.660
ACS39590.1
Putative exported protein; Orf3; Function of homologous gene experimentally demonstrated in an other organism; factor.
      
 0.660
ACS39591.1
Hypothetical protein; Function of homologous gene experimentally demonstrated in an other organism; factor.
      
 0.660
ACS39613.1
Conserved exported mxaD-like hypothetical protein; Homologs of previously reported genes of unknown function.
      
 0.660
ACS40142.1
Putative ABC transporter related, fused ATPase and transmembrane permease domains; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
      
 0.660
pepA
Cytosol aminopeptidase (putative leucine aminopeptidase); Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
      
 0.600
ACS39825.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.566
ACS42693.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.506
ACS42503.1
Putative ATP-independent RNA helicase, DEAD/DEAH-box family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family.
   
    0.497
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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