STRINGSTRING
ompR ompR ACS41454.1 ACS41454.1 ACS39557.1 ACS39557.1 ACS41797.1 ACS41797.1 ACS39903.1 ACS39903.1 ACS42480.1 ACS42480.1 ACS40792.1 ACS40792.1 ACS38466.1 ACS38466.1 ACS40635.1 ACS40635.1 ACS39899.1 ACS39899.1 ACS39405.1 ACS39405.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompRResponse regulator in two-component regulatory system (OmpR family); Function of strongly homologous gene; regulator. (244 aa)    
Predicted Functional Partners:
ACS41454.1
Putative sensor protein gacS (Synonyms : lemA); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.870
ACS39557.1
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.864
ACS41797.1
Putative signal transduction histidine kinase precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 0.855
ACS39903.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.852
ACS42480.1
Putative PAS sensor hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
 
 0.811
ACS40792.1
Putative sensor hybrid histidine kinase with two PAS and two response regulator receiver domains; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
 0.804
ACS38466.1
Two-component sensor histidine kinase with a PAS domain; Function of strongly homologous gene; enzyme.
 
 0.799
ACS40635.1
PhoR-like sensor histidine kinase; Function of strongly homologous gene; regulator.
 
 0.796
ACS39899.1
Integral membrane sensor signal transduction histidine kinase; Function of strongly homologous gene; regulator.
 
 
 0.750
ACS39405.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
 0.748
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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