STRINGSTRING
ACS39929.1 ACS39929.1 phnR phnR ACS39928.1 ACS39928.1 ACS39134.1 ACS39134.1 ACS40720.1 ACS40720.1 ACS41394.1 ACS41394.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS39929.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (400 aa)    
Predicted Functional Partners:
phnR
Transcriptional activator, LysR family; Function of strongly homologous gene; regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.615
ACS39928.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.455
ACS39134.1
Conserved hypothetical protein precursor; Homologs of previously reported genes of unknown function.
  
     0.418
ACS40720.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.410
ACS41394.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.409
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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