STRINGSTRING
ACS39932.1 ACS39932.1 ACS40096.1 ACS40096.1 mdcB mdcB mdcC mdcC fucA fucA ACS42486.1 ACS42486.1 meaC meaC ACS39608.1 ACS39608.1 ACS40847.1 ACS40847.1 mcl mcl ACS38201.1 ACS38201.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
Predicted Interactions
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gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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ACS39932.1Putative carbon-carbon lyase, HpcH/HpaI aldolase/citrate lyase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the HpcH/HpaI aldolase family. (296 aa)    
Predicted Functional Partners:
ACS40096.1
Hypothetical protein; No homology to any previously reported sequences; Belongs to the HpcH/HpaI aldolase family.
  
  
  0.945
mdcB
2'-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- A synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.
 
  
 0.932
mdcC
Malonate decarboxylase acyl carrier protein (Malonate decarboxylase delta subunit); Function of strongly homologous gene; enzyme.
  
  
 0.848
fucA
L-fuculose-1-phosphate aldolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
    0.797
ACS42486.1
Putative acetyl-coenzyme A synthetase (acsA-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
    
 0.728
meaC
Mesaconyl-CoA hydratase; Part of the glyoxylate regeneration cycle that is essential for growth on C1 and C2 compounds; Function experimentally demonstrated in the studied strain; enzyme.
 
  
 0.658
ACS39608.1
Orf7. Involved in tetrahydromethanopterin-linked formaldehyde oxidation; Function experimentally demonstrated in the studied strain; putative factor.
  
  
 0.624
ACS40847.1
Lactoylglutathione lyase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
 0.624
mcl
malyl-CoA lyase/beta-methylmalyl-CoA lyase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the HpcH/HpaI aldolase family.
  
  
 
0.605
ACS38201.1
Putative Long-chain acyl-CoA synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 0.596
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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