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ACS39979.1 ACS39979.1 emrB emrB ACS39882.1 ACS39882.1 vapC vapC ACS39978.1 ACS39978.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ACS39979.1Hypothetical protein; No homology to any previously reported sequences. (177 aa)    
Predicted Functional Partners:
emrB
Multidrug efflux system protein; Function of strongly homologous gene; transporter; Belongs to the major facilitator superfamily.
  
     0.495
ACS39882.1
Hypothetical protein, putative 5'-nucleotidase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.460
vapC
Conserved hypothetical protein with putative PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.421
ACS39978.1
Hypothetical protein; No homology to any previously reported sequences.
       0.404
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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