STRINGSTRING
ACS40075.1 ACS40075.1 rpmE rpmE rpmJ rpmJ ribE-2 ribE-2 ACS40073.1 ACS40073.1 ACS40072.1 ACS40072.1 rlmH rlmH ACS40076.1 ACS40076.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS40075.1MFS transporter membrane protein; Function of strongly homologous gene; transporter. (436 aa)    
Predicted Functional Partners:
rpmE
50S ribosomal protein L31; Function of strongly homologous gene; structure; Belongs to the bacterial ribosomal protein bL31 family.
   
    0.764
rpmJ
50S ribosomal protein L36; Function of strongly homologous gene; structure; Belongs to the bacterial ribosomal protein bL36 family.
   
    0.714
ribE-2
Riboflavin synthase, alpha subunit; Function of strongly homologous gene; enzyme.
   
    0.594
ACS40073.1
Putative membrane-bound metallopeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.479
ACS40072.1
Putative periplasmic carboxyl-terminal processing protease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase S41A family.
       0.455
rlmH
Conserved hypothetical protein, UPF0247 protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.455
ACS40076.1
Putative diguanylate cyclase/phosphodiesterase (GGDEF and EAL motifs); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.411
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.