Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS38120.1 | ACS40071.1 | MexAM1_META1p0156 | MexAM1_META1p2287 | Type IV pilus assembly PilZ. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.723 |
ACS38120.1 | ACS40094.1 | MexAM1_META1p0156 | MexAM1_META1p2310 | Type IV pilus assembly PilZ. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.748 |
ACS38120.1 | ACS40095.1 | MexAM1_META1p0156 | MexAM1_META1p2311 | Type IV pilus assembly PilZ. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.578 |
ACS38120.1 | ACS40220.1 | MexAM1_META1p0156 | MexAM1_META1p2441 | Type IV pilus assembly PilZ. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.774 |
ACS38120.1 | ACS40928.1 | MexAM1_META1p0156 | MexAM1_META1p3181 | Type IV pilus assembly PilZ. | Conserved hypothetical protein, tetratricopeptide TPR_2 repeat protein; Homologs of previously reported genes of unknown function. | 0.768 |
ACS38120.1 | ACS41555.1 | MexAM1_META1p0156 | MexAM1_META1p3865 | Type IV pilus assembly PilZ. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.739 |
ACS38120.1 | ACS42748.1 | MexAM1_META1p0156 | MexAM1_META1p5144 | Type IV pilus assembly PilZ. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.457 |
ACS38120.1 | cpaD | MexAM1_META1p0156 | MexAM1_META1p2446 | Type IV pilus assembly PilZ. | Pilus assembly protein cpaD; Function of strongly homologous gene; structure. | 0.768 |
ACS38120.1 | cpaE | MexAM1_META1p0156 | MexAM1_META1p2447 | Type IV pilus assembly PilZ. | Pilus assembly protein cpaE; Function of strongly homologous gene; structure. | 0.768 |
ACS40046.1 | ACS40071.1 | MexAM1_META1p2255 | MexAM1_META1p2287 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.729 |
ACS40046.1 | ACS40094.1 | MexAM1_META1p2255 | MexAM1_META1p2310 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.758 |
ACS40046.1 | ACS40095.1 | MexAM1_META1p2255 | MexAM1_META1p2311 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.581 |
ACS40046.1 | ACS40220.1 | MexAM1_META1p2255 | MexAM1_META1p2441 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.775 |
ACS40046.1 | ACS40928.1 | MexAM1_META1p2255 | MexAM1_META1p3181 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein, tetratricopeptide TPR_2 repeat protein; Homologs of previously reported genes of unknown function. | 0.771 |
ACS40046.1 | ACS41555.1 | MexAM1_META1p2255 | MexAM1_META1p3865 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.734 |
ACS40046.1 | ACS42748.1 | MexAM1_META1p2255 | MexAM1_META1p5144 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.509 |
ACS40046.1 | cpaD | MexAM1_META1p2255 | MexAM1_META1p2446 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Pilus assembly protein cpaD; Function of strongly homologous gene; structure. | 0.772 |
ACS40046.1 | cpaE | MexAM1_META1p2255 | MexAM1_META1p2447 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Pilus assembly protein cpaE; Function of strongly homologous gene; structure. | 0.771 |
ACS40071.1 | ACS38120.1 | MexAM1_META1p2287 | MexAM1_META1p0156 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Type IV pilus assembly PilZ. | 0.723 |
ACS40071.1 | ACS40046.1 | MexAM1_META1p2287 | MexAM1_META1p2255 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.729 |
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