Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS40133.1 | ACS42085.1 | MexAM1_META1p2350 | MexAM1_META1p4453 | Metallophosphoesterase; Function of strongly homologous gene; enzyme. | Conserved hypothetical protein, ankyrin repeat domain protein; Homologs of previously reported genes of unknown function. | 0.535 |
ACS40133.1 | atoE | MexAM1_META1p2350 | MexAM1_META1p2351 | Metallophosphoesterase; Function of strongly homologous gene; enzyme. | Short-chain fatty acid transporter (scFAT family); Function of strongly homologous gene; transporter. | 0.474 |
ACS40133.1 | clpB | MexAM1_META1p2350 | MexAM1_META1p2349 | Metallophosphoesterase; Function of strongly homologous gene; enzyme. | Protein disaggregation chaperone; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.456 |
ACS42085.1 | ACS40133.1 | MexAM1_META1p4453 | MexAM1_META1p2350 | Conserved hypothetical protein, ankyrin repeat domain protein; Homologs of previously reported genes of unknown function. | Metallophosphoesterase; Function of strongly homologous gene; enzyme. | 0.535 |
atoE | ACS40133.1 | MexAM1_META1p2351 | MexAM1_META1p2350 | Short-chain fatty acid transporter (scFAT family); Function of strongly homologous gene; transporter. | Metallophosphoesterase; Function of strongly homologous gene; enzyme. | 0.474 |
clpB | ACS40133.1 | MexAM1_META1p2349 | MexAM1_META1p2350 | Protein disaggregation chaperone; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | Metallophosphoesterase; Function of strongly homologous gene; enzyme. | 0.456 |