STRINGSTRING
atoE atoE ACS41973.1 ACS41973.1 atoA atoA atoD atoD ACS40133.1 ACS40133.1 ACS38227.1 ACS38227.1 cstA cstA ACS39802.1 ACS39802.1 ACS41728.1 ACS41728.1 ACS40238.1 ACS40238.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atoEShort-chain fatty acid transporter (scFAT family); Function of strongly homologous gene; transporter. (471 aa)    
Predicted Functional Partners:
ACS41973.1
H+/gluconate symporter family protein; Function of strongly homologous gene; transporter.
 
   
 0.633
atoA
acetyl-CoA:acetoacetyl-CoA transferase, beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.558
atoD
acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.492
ACS40133.1
Metallophosphoesterase; Function of strongly homologous gene; enzyme.
       0.474
ACS38227.1
Putative transcriptional regulator, LuxR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.440
cstA
Carbon starvation protein A precursor; Function of homologous gene experimentally demonstrated in an other organism; membrane component.
  
     0.438
ACS39802.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.435
ACS41728.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.415
ACS40238.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.402
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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