Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS40176.1 | ACS40281.1 | MexAM1_META1p2393 | MexAM1_META1p2502 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative capsule polysaccharide export outer membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.483 |
ACS40176.1 | ACS41403.1 | MexAM1_META1p2393 | MexAM1_META1p3692 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative capsule polysaccharide export outer membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.481 |
ACS40176.1 | ACS42030.1 | MexAM1_META1p2393 | MexAM1_META1p4397 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative long-chain fatty acid outer membrane transporter (fadL); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.421 |
ACS40176.1 | rfbC-2 | MexAM1_META1p2393 | MexAM1_META1p2394 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.511 |
ACS40281.1 | ACS40176.1 | MexAM1_META1p2502 | MexAM1_META1p2393 | Putative capsule polysaccharide export outer membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.483 |
ACS40281.1 | ACS41403.1 | MexAM1_META1p2502 | MexAM1_META1p3692 | Putative capsule polysaccharide export outer membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Putative capsule polysaccharide export outer membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.900 |
ACS41403.1 | ACS40176.1 | MexAM1_META1p3692 | MexAM1_META1p2393 | Putative capsule polysaccharide export outer membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.481 |
ACS41403.1 | ACS40281.1 | MexAM1_META1p3692 | MexAM1_META1p2502 | Putative capsule polysaccharide export outer membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Putative capsule polysaccharide export outer membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.900 |
ACS42030.1 | ACS40176.1 | MexAM1_META1p4397 | MexAM1_META1p2393 | Putative long-chain fatty acid outer membrane transporter (fadL); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.421 |
rfbC-2 | ACS40176.1 | MexAM1_META1p2394 | MexAM1_META1p2393 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.511 |