Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS40209.1 | ACS40210.1 | MexAM1_META1p2428 | MexAM1_META1p2429 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative oligopeptide transporter, OPT superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.511 |
ACS40210.1 | ACS40209.1 | MexAM1_META1p2429 | MexAM1_META1p2428 | Putative oligopeptide transporter, OPT superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.511 |
ACS40210.1 | ACS40211.1 | MexAM1_META1p2429 | MexAM1_META1p2430 | Putative oligopeptide transporter, OPT superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | ABC-2 transporter, permease; Function of strongly homologous gene; transporter. | 0.574 |
ACS40210.1 | atpB | MexAM1_META1p2429 | MexAM1_META1p3388 | Putative oligopeptide transporter, OPT superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Fo ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.559 |
ACS40210.1 | cdsA | MexAM1_META1p2429 | MexAM1_META1p2069 | Putative oligopeptide transporter, OPT superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | CDP-diglyceride synthase; Function of strongly homologous gene; enzyme; Belongs to the CDS family. | 0.529 |
ACS40211.1 | ACS40210.1 | MexAM1_META1p2430 | MexAM1_META1p2429 | ABC-2 transporter, permease; Function of strongly homologous gene; transporter. | Putative oligopeptide transporter, OPT superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.574 |
atpB | ACS40210.1 | MexAM1_META1p3388 | MexAM1_META1p2429 | Fo ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | Putative oligopeptide transporter, OPT superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.559 |
atpB | cdsA | MexAM1_META1p3388 | MexAM1_META1p2069 | Fo ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | CDP-diglyceride synthase; Function of strongly homologous gene; enzyme; Belongs to the CDS family. | 0.632 |
cdsA | ACS40210.1 | MexAM1_META1p2069 | MexAM1_META1p2429 | CDP-diglyceride synthase; Function of strongly homologous gene; enzyme; Belongs to the CDS family. | Putative oligopeptide transporter, OPT superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.529 |
cdsA | atpB | MexAM1_META1p2069 | MexAM1_META1p3388 | CDP-diglyceride synthase; Function of strongly homologous gene; enzyme; Belongs to the CDS family. | Fo ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.632 |