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ptsN ptsN hpf hpf ACS38913.1 ACS38913.1 ptsP ptsP ACS38914.1 ACS38914.1 ACS40248.1 ACS40248.1 rpoN rpoN ACS39035.1 ACS39035.1 ureC ureC glnB glnB bchI bchI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptsNSugar-specific enzyme IIA component of PTS; Function of strongly homologous gene; transporter. (155 aa)    
Predicted Functional Partners:
hpf
Ribosomal subunit interface protein, sigma 54 (RpoN) modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
  
  
 0.907
ACS38913.1
Putative Phosphoryl transfer system, HPr; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.855
ptsP
Phosphoenolpyruvate-protein phosphotransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the PEP-utilizing enzyme family.
  
   
 0.817
ACS38914.1
Putative PTS system subfamily mannose/fructose-specific IIA component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.805
ACS40248.1
Hypothetical protein; No homology to any previously reported sequences.
       0.797
rpoN
Sigma N (sigma 54) factor of RNA polymerase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.779
ACS39035.1
Transcriptional regulator, DeoR family; Function of strongly homologous gene; putative regulator.
 
  
 0.732
ureC
Urease subunit alpha (Urea amidohydrolase subunit alpha); Function of strongly homologous gene; enzyme.
      
 0.600
glnB
Regulatory protein (P-II) for nitrogen assimilation by glutamine synthetase (ATase); Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the P(II) protein family.
   
  
 0.531
bchI
Mg chelatase subunit Bchl, participate to introduce Mg in bacteriochlorophyl with BchH and BchD; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
       0.487
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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