STRINGSTRING
soxA soxA soxB-2 soxB-2 soxZ soxZ soxC soxC soxY soxY ACS40344.1 ACS40344.1 soxX soxX ACS41290.1 ACS41290.1 ACS41291.1 ACS41291.1 ACS39549.1 ACS39549.1 sseA sseA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
soxADiheme cytochrome c, sulfur oxidising protein SoxA; Function of strongly homologous gene; carrier. (288 aa)    
Predicted Functional Partners:
soxB-2
Sulfur/thiosulfate oxidation protein precursor (tat pathway signal); Function of strongly homologous gene; enzyme; Belongs to the 5'-nucleotidase family.
 
  
 0.995
soxZ
Sulfur oxidation protein SoxZ; Function of strongly homologous gene; enzyme.
 
  
 0.993
soxC
Sulfite oxidase precursor (tat pathway signal); Function of strongly homologous gene; enzyme.
 
 
 0.992
soxY
Sulfur oxidation protein precursor (tat pathway signal); Function of strongly homologous gene; enzyme.
 
  
 0.991
ACS40344.1
Putative sulfite oxidase cytochrome subunit (SoxD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
  
  0.990
soxX
Cytochrome c SoxX precursor; Function of strongly homologous gene; carrier.
 
  
 0.988
ACS41290.1
Putative sulfite oxidase precursor (tat pathway signal); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.975
ACS41291.1
Cytochrome c, class I precursor; Function of strongly homologous gene; carrier.
  
  
  0.973
ACS39549.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.930
sseA
3-mercaptopyruvate sulfurtransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.921
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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