Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS40437.1 | ACS40438.1 | MexAM1_META1p2668 | MexAM1_META1p2670 | Putative sodium/calcium exchanger type membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | Hypothetical protein; No homology to any previously reported sequences. | 0.425 |
ACS40438.1 | ACS40437.1 | MexAM1_META1p2670 | MexAM1_META1p2668 | Hypothetical protein; No homology to any previously reported sequences. | Putative sodium/calcium exchanger type membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.425 |
ACS40438.1 | ACS42115.1 | MexAM1_META1p2670 | MexAM1_META1p4484 | Hypothetical protein; No homology to any previously reported sequences. | Putative flagellar basal-body rod modification protein (Synonyms : FlgD flaV, fla FIV, fla FVI); Required for flagellar hook formation. May act as a scaffolding protein. | 0.521 |
ACS40438.1 | flgD | MexAM1_META1p2670 | MexAM1_META1p0513 | Hypothetical protein; No homology to any previously reported sequences. | FlgD (basal-body rod modification protein)/hook formation protein; Function of strongly homologous gene; structure. | 0.521 |
ACS42115.1 | ACS40438.1 | MexAM1_META1p4484 | MexAM1_META1p2670 | Putative flagellar basal-body rod modification protein (Synonyms : FlgD flaV, fla FIV, fla FVI); Required for flagellar hook formation. May act as a scaffolding protein. | Hypothetical protein; No homology to any previously reported sequences. | 0.521 |
ACS42115.1 | flgD | MexAM1_META1p4484 | MexAM1_META1p0513 | Putative flagellar basal-body rod modification protein (Synonyms : FlgD flaV, fla FIV, fla FVI); Required for flagellar hook formation. May act as a scaffolding protein. | FlgD (basal-body rod modification protein)/hook formation protein; Function of strongly homologous gene; structure. | 0.910 |
flgD | ACS40438.1 | MexAM1_META1p0513 | MexAM1_META1p2670 | FlgD (basal-body rod modification protein)/hook formation protein; Function of strongly homologous gene; structure. | Hypothetical protein; No homology to any previously reported sequences. | 0.521 |
flgD | ACS42115.1 | MexAM1_META1p0513 | MexAM1_META1p4484 | FlgD (basal-body rod modification protein)/hook formation protein; Function of strongly homologous gene; structure. | Putative flagellar basal-body rod modification protein (Synonyms : FlgD flaV, fla FIV, fla FVI); Required for flagellar hook formation. May act as a scaffolding protein. | 0.910 |