Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS40467.1 | ACS40468.1 | MexAM1_META1p2702 | MexAM1_META1p2703 | Aspartate transaminase; Function of strongly homologous gene; enzyme. | Hypothetical protein; Doubtful CDS. | 0.503 |
ACS40468.1 | ACS40467.1 | MexAM1_META1p2703 | MexAM1_META1p2702 | Hypothetical protein; Doubtful CDS. | Aspartate transaminase; Function of strongly homologous gene; enzyme. | 0.503 |
ACS40468.1 | ACS40469.1 | MexAM1_META1p2703 | MexAM1_META1p2704 | Hypothetical protein; Doubtful CDS. | Putative integral membrane sensor signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. | 0.464 |
ACS40468.1 | ACS40471.1 | MexAM1_META1p2703 | MexAM1_META1p2706 | Hypothetical protein; Doubtful CDS. | Transcriptional regulator, MarR family; Function of strongly homologous gene; regulator. | 0.464 |
ACS40468.1 | ompR-2 | MexAM1_META1p2703 | MexAM1_META1p2705 | Hypothetical protein; Doubtful CDS. | DNA-binding response regulator in two-component regulatory system with EnvZ; Function of strongly homologous gene; regulator. | 0.464 |
ACS40469.1 | ACS40468.1 | MexAM1_META1p2704 | MexAM1_META1p2703 | Putative integral membrane sensor signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. | Hypothetical protein; Doubtful CDS. | 0.464 |
ACS40469.1 | ACS40471.1 | MexAM1_META1p2704 | MexAM1_META1p2706 | Putative integral membrane sensor signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. | Transcriptional regulator, MarR family; Function of strongly homologous gene; regulator. | 0.797 |
ACS40469.1 | ompR-2 | MexAM1_META1p2704 | MexAM1_META1p2705 | Putative integral membrane sensor signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. | DNA-binding response regulator in two-component regulatory system with EnvZ; Function of strongly homologous gene; regulator. | 0.996 |
ACS40471.1 | ACS40468.1 | MexAM1_META1p2706 | MexAM1_META1p2703 | Transcriptional regulator, MarR family; Function of strongly homologous gene; regulator. | Hypothetical protein; Doubtful CDS. | 0.464 |
ACS40471.1 | ACS40469.1 | MexAM1_META1p2706 | MexAM1_META1p2704 | Transcriptional regulator, MarR family; Function of strongly homologous gene; regulator. | Putative integral membrane sensor signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. | 0.797 |
ACS40471.1 | ompR-2 | MexAM1_META1p2706 | MexAM1_META1p2705 | Transcriptional regulator, MarR family; Function of strongly homologous gene; regulator. | DNA-binding response regulator in two-component regulatory system with EnvZ; Function of strongly homologous gene; regulator. | 0.802 |
ompR-2 | ACS40468.1 | MexAM1_META1p2705 | MexAM1_META1p2703 | DNA-binding response regulator in two-component regulatory system with EnvZ; Function of strongly homologous gene; regulator. | Hypothetical protein; Doubtful CDS. | 0.464 |
ompR-2 | ACS40469.1 | MexAM1_META1p2705 | MexAM1_META1p2704 | DNA-binding response regulator in two-component regulatory system with EnvZ; Function of strongly homologous gene; regulator. | Putative integral membrane sensor signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. | 0.996 |
ompR-2 | ACS40471.1 | MexAM1_META1p2705 | MexAM1_META1p2706 | DNA-binding response regulator in two-component regulatory system with EnvZ; Function of strongly homologous gene; regulator. | Transcriptional regulator, MarR family; Function of strongly homologous gene; regulator. | 0.802 |