Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS40522.1 | ACS40524.1 | MexAM1_META1p2762 | MexAM1_META1p2764 | Multidrug efflux system protein (acrB ou acrF); Function of homologous gene experimentally demonstrated in an other organism; transporter. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.516 |
ACS40522.1 | acrA | MexAM1_META1p2762 | MexAM1_META1p2763 | Multidrug efflux system protein (acrB ou acrF); Function of homologous gene experimentally demonstrated in an other organism; transporter. | Multidrug efflux system; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.993 |
ACS40522.1 | emrE | MexAM1_META1p2762 | MexAM1_META1p2765 | Multidrug efflux system protein (acrB ou acrF); Function of homologous gene experimentally demonstrated in an other organism; transporter. | Small multidrug efflux pump, DMT superfamily; Function of strongly homologous gene; transporter. | 0.532 |
ACS40524.1 | ACS40522.1 | MexAM1_META1p2764 | MexAM1_META1p2762 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Multidrug efflux system protein (acrB ou acrF); Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.516 |
ACS40524.1 | acrA | MexAM1_META1p2764 | MexAM1_META1p2763 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Multidrug efflux system; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.623 |
ACS40524.1 | emrE | MexAM1_META1p2764 | MexAM1_META1p2765 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Small multidrug efflux pump, DMT superfamily; Function of strongly homologous gene; transporter. | 0.796 |
acrA | ACS40522.1 | MexAM1_META1p2763 | MexAM1_META1p2762 | Multidrug efflux system; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Multidrug efflux system protein (acrB ou acrF); Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.993 |
acrA | ACS40524.1 | MexAM1_META1p2763 | MexAM1_META1p2764 | Multidrug efflux system; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.623 |
acrA | emrE | MexAM1_META1p2763 | MexAM1_META1p2765 | Multidrug efflux system; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Small multidrug efflux pump, DMT superfamily; Function of strongly homologous gene; transporter. | 0.634 |
emrE | ACS40522.1 | MexAM1_META1p2765 | MexAM1_META1p2762 | Small multidrug efflux pump, DMT superfamily; Function of strongly homologous gene; transporter. | Multidrug efflux system protein (acrB ou acrF); Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.532 |
emrE | ACS40524.1 | MexAM1_META1p2765 | MexAM1_META1p2764 | Small multidrug efflux pump, DMT superfamily; Function of strongly homologous gene; transporter. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.796 |
emrE | acrA | MexAM1_META1p2765 | MexAM1_META1p2763 | Small multidrug efflux pump, DMT superfamily; Function of strongly homologous gene; transporter. | Multidrug efflux system; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.634 |
emrE | sugE | MexAM1_META1p2765 | MexAM1_META1p1284 | Small multidrug efflux pump, DMT superfamily; Function of strongly homologous gene; transporter. | Multidrug efflux system protein; Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.836 |
sugE | emrE | MexAM1_META1p1284 | MexAM1_META1p2765 | Multidrug efflux system protein; Function of homologous gene experimentally demonstrated in an other organism; transporter. | Small multidrug efflux pump, DMT superfamily; Function of strongly homologous gene; transporter. | 0.836 |