node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS40541.1 | rplA | MexAM1_META1p2787 | MexAM1_META1p4386 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 50S ribosomal subunit protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.925 |
ACS40541.1 | rplJ | MexAM1_META1p2787 | MexAM1_META1p4403 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 50S ribosomal subunit protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.914 |
ACS40541.1 | rplK | MexAM1_META1p2787 | MexAM1_META1p4385 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.926 |
ACS40541.1 | rplM | MexAM1_META1p2787 | MexAM1_META1p2739 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 50S ribosomal subunit protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.917 |
ACS40541.1 | rpmG | MexAM1_META1p2787 | MexAM1_META1p1700 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 50S ribosomal subunit protein L33; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL33 family. | 0.925 |
ACS40541.1 | rpsD | MexAM1_META1p2787 | MexAM1_META1p5190 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.921 |
ACS40541.1 | rpsG | MexAM1_META1p2787 | MexAM1_META1p2149 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.914 |
ACS40541.1 | rpsK | MexAM1_META1p2787 | MexAM1_META1p2169 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 30S ribosomal subunit protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.917 |
ACS40541.1 | rpsN | MexAM1_META1p2787 | MexAM1_META1p2179 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 30S ribosomal subunit protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.919 |
ACS40541.1 | secG | MexAM1_META1p2787 | MexAM1_META1p5111 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative secG: preprotein translocase; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.941 |
rplA | ACS40541.1 | MexAM1_META1p4386 | MexAM1_META1p2787 | 50S ribosomal subunit protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.925 |
rplA | rplJ | MexAM1_META1p4386 | MexAM1_META1p4403 | 50S ribosomal subunit protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 50S ribosomal subunit protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.992 |
rplA | rplK | MexAM1_META1p4386 | MexAM1_META1p4385 | 50S ribosomal subunit protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
rplA | rplM | MexAM1_META1p4386 | MexAM1_META1p2739 | 50S ribosomal subunit protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 50S ribosomal subunit protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.994 |
rplA | rpmG | MexAM1_META1p4386 | MexAM1_META1p1700 | 50S ribosomal subunit protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 50S ribosomal subunit protein L33; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL33 family. | 0.971 |
rplA | rpsD | MexAM1_META1p4386 | MexAM1_META1p5190 | 50S ribosomal subunit protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.979 |
rplA | rpsG | MexAM1_META1p4386 | MexAM1_META1p2149 | 50S ribosomal subunit protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.981 |
rplA | rpsK | MexAM1_META1p4386 | MexAM1_META1p2169 | 50S ribosomal subunit protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 30S ribosomal subunit protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.986 |
rplA | rpsN | MexAM1_META1p4386 | MexAM1_META1p2179 | 50S ribosomal subunit protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 30S ribosomal subunit protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.976 |
rplA | secG | MexAM1_META1p4386 | MexAM1_META1p5111 | 50S ribosomal subunit protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Putative secG: preprotein translocase; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.827 |