node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS38609.1 | ACS40644.1 | MexAM1_META1p0680 | MexAM1_META1p2891 | Hypothetical protein; No homology to any previously reported sequences. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.828 |
ACS38609.1 | infB | MexAM1_META1p0680 | MexAM1_META1p2890 | Hypothetical protein; No homology to any previously reported sequences. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.863 |
ACS38609.1 | rimP | MexAM1_META1p0680 | MexAM1_META1p2893 | Hypothetical protein; No homology to any previously reported sequences. | Conserved hypothetical protein, UPF0090 protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.830 |
ACS38609.1 | rplD | MexAM1_META1p0680 | MexAM1_META1p2154 | Hypothetical protein; No homology to any previously reported sequences. | 50S ribosomal subunit protein L4, regulates expression of S10 operon; Forms part of the polypeptide exit tunnel. | 0.896 |
ACS38609.1 | rplU | MexAM1_META1p0680 | MexAM1_META1p4856 | Hypothetical protein; No homology to any previously reported sequences. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.678 |
ACS38609.1 | rplW | MexAM1_META1p0680 | MexAM1_META1p2155 | Hypothetical protein; No homology to any previously reported sequences. | 50S ribosomal subunit protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.896 |
ACS38609.1 | rpsB | MexAM1_META1p0680 | MexAM1_META1p2057 | Hypothetical protein; No homology to any previously reported sequences. | 30S ribosomal protein S2; Function of strongly homologous gene; structure; Belongs to the universal ribosomal protein uS2 family. | 0.925 |
ACS38609.1 | rpsK | MexAM1_META1p0680 | MexAM1_META1p2169 | Hypothetical protein; No homology to any previously reported sequences. | 30S ribosomal subunit protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.891 |
ACS38609.1 | rpsL | MexAM1_META1p0680 | MexAM1_META1p2148 | Hypothetical protein; No homology to any previously reported sequences. | 30S ribosomal subunit protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.916 |
ACS40644.1 | ACS38609.1 | MexAM1_META1p2891 | MexAM1_META1p0680 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Hypothetical protein; No homology to any previously reported sequences. | 0.828 |
ACS40644.1 | infB | MexAM1_META1p2891 | MexAM1_META1p2890 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.936 |
ACS40644.1 | nusA | MexAM1_META1p2891 | MexAM1_META1p2892 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Transcription termination/antitermination L factor; Participates in both transcription termination and antitermination. | 0.937 |
ACS40644.1 | rimP | MexAM1_META1p2891 | MexAM1_META1p2893 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein, UPF0090 protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.928 |
ACS40644.1 | rplD | MexAM1_META1p2891 | MexAM1_META1p2154 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 50S ribosomal subunit protein L4, regulates expression of S10 operon; Forms part of the polypeptide exit tunnel. | 0.757 |
ACS40644.1 | rplU | MexAM1_META1p2891 | MexAM1_META1p4856 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.760 |
ACS40644.1 | rplW | MexAM1_META1p2891 | MexAM1_META1p2155 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 50S ribosomal subunit protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.783 |
ACS40644.1 | rpsB | MexAM1_META1p2891 | MexAM1_META1p2057 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 30S ribosomal protein S2; Function of strongly homologous gene; structure; Belongs to the universal ribosomal protein uS2 family. | 0.802 |
ACS40644.1 | rpsK | MexAM1_META1p2891 | MexAM1_META1p2169 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 30S ribosomal subunit protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.769 |
ACS40644.1 | rpsL | MexAM1_META1p2891 | MexAM1_META1p2148 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 30S ribosomal subunit protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.779 |
infB | ACS38609.1 | MexAM1_META1p2890 | MexAM1_META1p0680 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Hypothetical protein; No homology to any previously reported sequences. | 0.863 |