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pufA pufA pufB pufB pufL pufL pufM pufM pufC pufC puhA puhA bchZ bchZ bchY bchY bchC bchC bchX bchX crtF crtF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pufALight-harvesting complex 1 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (62 aa)    
Predicted Functional Partners:
pufB
Light-harvesting complex 1 beta chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
 
 0.999
pufL
Photosynthetic reaction center L subunit; Function of homologous gene experimentally demonstrated in an other organism; membrane component; Belongs to the reaction center PufL/M/PsbA/D family.
 
 0.998
pufM
Photosynthetic reaction center M protein; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
 
 0.997
pufC
Photosynthetic reaction center cytochrome c subunit-related; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.
 
 
 0.981
puhA
Photosynthetic reaction center subunit H; Function of homologous gene experimentally demonstrated in an other organism; membrane component.
  
 0.973
bchZ
Bacteriochlorophyllide reductase subunit; Function of strongly homologous gene; enzyme.
 
   
 0.887
bchY
Bacteriochlorophyllide reductase subunit BchY; Function of strongly homologous gene; enzyme.
 
  
 0.881
bchC
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase; Function of strongly homologous gene; enzyme.
 
   
 0.876
bchX
Bacteriochlorophyllide reductase iron protein subunit BchX; Function of strongly homologous gene; enzyme; Belongs to the NifH/BchL/ChlL family.
 
     0.851
crtF
Hydroxyneurosporene methyltransferase CrtF; Function of strongly homologous gene; enzyme.
 
     0.839
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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