STRINGSTRING
recJ recJ mutL mutL recQ recQ recO recO recR recR recN recN recF recF recG recG priA priA dprA dprA ibpA ibpA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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recJPutative single-strand DNA-specific exonuclease RecJ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (611 aa)    
Predicted Functional Partners:
mutL
DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
  
   
 0.856
recQ
ATP-dependent DNA helicase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.849
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
   
 0.825
recR
Recombination protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
 
   
 0.825
recN
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
  
  
 0.799
recF
Putative RecF protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.
 
   
 0.787
recG
DNA helicase, ATP-dependent resolution of Holliday junctions, branch migration; Function of strongly homologous gene; enzyme.
 
   
 0.718
priA
Primosome factor N' (replication factor Y); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
 
     0.712
dprA
DNA protecting protein DprA; Function of strongly homologous gene; factor.
 
   
 0.671
ibpA
Small heat shock protein; Function of strongly homologous gene; factor; Belongs to the small heat shock protein (HSP20) family.
  
   
 0.661
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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