STRINGSTRING
ACS40794.1 ACS40794.1 petA petA ACS42085.1 ACS42085.1 petC petC ACS39268.1 ACS39268.1 alaS alaS ACS41184.1 ACS41184.1 ACS38075.1 ACS38075.1 fdh1B fdh1B ACS38248.1 ACS38248.1 petB petB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ACS40794.1Cytochrome c, class I; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (438 aa)    
Predicted Functional Partners:
petA
Ubiquinol-cytochrome c reductase complex, iron-sulfur subunit (Rieske iron-sulfur protein); Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.940
ACS42085.1
Conserved hypothetical protein, ankyrin repeat domain protein; Homologs of previously reported genes of unknown function.
   
 0.931
petC
Ubiquinol-cytochrome c reductase complex, cytochrome c1 subunit; Function of strongly homologous gene; enzyme.
  
 0.916
ACS39268.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.892
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.876
ACS41184.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
 0.868
ACS38075.1
Putative 4Fe-4S ferredoxin, iron-sulfur binding; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.856
fdh1B
Tungsten-containing formate dehydrogenase beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.792
ACS38248.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.788
petB
Ubiquinol-cytochrome c reductase complex, cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.778
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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