Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS39239.1 | ACS40813.1 | MexAM1_META1p1377 | MexAM1_META1p3065 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.720 |
ACS40812.1 | ACS40813.1 | MexAM1_META1p3064 | MexAM1_META1p3065 | Predicted transcriptional regulator containing the CopG/Arc/MetJ DNA- binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.961 |
ACS40812.1 | hpt | MexAM1_META1p3064 | MexAM1_META1p3063 | Predicted transcriptional regulator containing the CopG/Arc/MetJ DNA- binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | Hypoxanthine phosphoribosyl transferase; Function of strongly homologous gene; enzyme; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.481 |
ACS40813.1 | ACS39239.1 | MexAM1_META1p3065 | MexAM1_META1p1377 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.720 |
ACS40813.1 | ACS40812.1 | MexAM1_META1p3065 | MexAM1_META1p3064 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Predicted transcriptional regulator containing the CopG/Arc/MetJ DNA- binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 0.961 |
ACS40813.1 | ACS41829.1 | MexAM1_META1p3065 | MexAM1_META1p4188 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.720 |
ACS40813.1 | dinJ | MexAM1_META1p3065 | MexAM1_META1p4285 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Addiction module antitoxin, RelB/dinJ family (plasmid stabilization system); Function of strongly homologous gene; factor. | 0.699 |
ACS40813.1 | hpt | MexAM1_META1p3065 | MexAM1_META1p3063 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Hypoxanthine phosphoribosyl transferase; Function of strongly homologous gene; enzyme; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.481 |
ACS41829.1 | ACS40813.1 | MexAM1_META1p4188 | MexAM1_META1p3065 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.720 |
dinJ | ACS40813.1 | MexAM1_META1p4285 | MexAM1_META1p3065 | Addiction module antitoxin, RelB/dinJ family (plasmid stabilization system); Function of strongly homologous gene; factor. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.699 |
hpt | ACS40812.1 | MexAM1_META1p3063 | MexAM1_META1p3064 | Hypoxanthine phosphoribosyl transferase; Function of strongly homologous gene; enzyme; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | Predicted transcriptional regulator containing the CopG/Arc/MetJ DNA- binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 0.481 |
hpt | ACS40813.1 | MexAM1_META1p3063 | MexAM1_META1p3065 | Hypoxanthine phosphoribosyl transferase; Function of strongly homologous gene; enzyme; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.481 |