Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS38898.1 | ACS40833.1 | MexAM1_META1p1003 | MexAM1_META1p3085 | Serine-type D-alanyl-D-alanine carboxypeptidase precursor; Function of strongly homologous gene; enzyme; Belongs to the peptidase S11 family. | Conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein; Homologs of previously reported genes of unknown function. | 0.629 |
ACS40832.1 | ACS40833.1 | MexAM1_META1p3084 | MexAM1_META1p3085 | Conserved hypothetical protein with putative cheZ domain; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein; Homologs of previously reported genes of unknown function. | 0.471 |
ACS40833.1 | ACS38898.1 | MexAM1_META1p3085 | MexAM1_META1p1003 | Conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein; Homologs of previously reported genes of unknown function. | Serine-type D-alanyl-D-alanine carboxypeptidase precursor; Function of strongly homologous gene; enzyme; Belongs to the peptidase S11 family. | 0.629 |
ACS40833.1 | ACS40832.1 | MexAM1_META1p3085 | MexAM1_META1p3084 | Conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein with putative cheZ domain; Homologs of previously reported genes of unknown function. | 0.471 |
ACS40833.1 | ACS40870.1 | MexAM1_META1p3085 | MexAM1_META1p3122 | Conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein; Homologs of previously reported genes of unknown function. | Putative penicillin binding protein, beta-lactamase/transpeptidase-like superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase S11 family. | 0.583 |
ACS40833.1 | ACS41098.1 | MexAM1_META1p3085 | MexAM1_META1p3361 | Conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.636 |
ACS40833.1 | ACS42859.1 | MexAM1_META1p3085 | MexAM1_META1p5257 | Conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein; Homologs of previously reported genes of unknown function. | Putative D-alanyl-D-alanine carboxypeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase S11 family. | 0.659 |
ACS40870.1 | ACS40833.1 | MexAM1_META1p3122 | MexAM1_META1p3085 | Putative penicillin binding protein, beta-lactamase/transpeptidase-like superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase S11 family. | Conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein; Homologs of previously reported genes of unknown function. | 0.583 |
ACS41098.1 | ACS40833.1 | MexAM1_META1p3361 | MexAM1_META1p3085 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein; Homologs of previously reported genes of unknown function. | 0.636 |
ACS42859.1 | ACS40833.1 | MexAM1_META1p5257 | MexAM1_META1p3085 | Putative D-alanyl-D-alanine carboxypeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase S11 family. | Conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein; Homologs of previously reported genes of unknown function. | 0.659 |