Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS40910.1 | ACS40911.1 | MexAM1_META1p3162 | MexAM1_META1p3163 | Putative molybdopterin oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein; No homology to any previously reported sequences. | 0.524 |
ACS40910.1 | dnaK | MexAM1_META1p3162 | MexAM1_META1p3164 | Putative molybdopterin oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.431 |
ACS40911.1 | ACS40910.1 | MexAM1_META1p3163 | MexAM1_META1p3162 | Hypothetical protein; No homology to any previously reported sequences. | Putative molybdopterin oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.524 |
ACS40911.1 | dnaK | MexAM1_META1p3163 | MexAM1_META1p3164 | Hypothetical protein; No homology to any previously reported sequences. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.420 |
dnaK | ACS40910.1 | MexAM1_META1p3164 | MexAM1_META1p3162 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Putative molybdopterin oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.431 |
dnaK | ACS40911.1 | MexAM1_META1p3164 | MexAM1_META1p3163 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Hypothetical protein; No homology to any previously reported sequences. | 0.420 |