node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS40925.1 | ACS40926.1 | MexAM1_META1p3178 | MexAM1_META1p3179 | Putative transcriptional regulator, cold shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | Hypothetical protein; No homology to any previously reported sequences. | 0.495 |
ACS40925.1 | rplO | MexAM1_META1p3178 | MexAM1_META1p2173 | Putative transcriptional regulator, cold shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.424 |
ACS40925.1 | rplS | MexAM1_META1p3178 | MexAM1_META1p5186 | Putative transcriptional regulator, cold shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.418 |
ACS40925.1 | rplT | MexAM1_META1p3178 | MexAM1_META1p1522 | Putative transcriptional regulator, cold shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.433 |
ACS40925.1 | rpmA | MexAM1_META1p3178 | MexAM1_META1p4855 | Putative transcriptional regulator, cold shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 50S ribosomal protein L27; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL27 family. | 0.425 |
ACS40925.1 | rpmE | MexAM1_META1p3178 | MexAM1_META1p2358 | Putative transcriptional regulator, cold shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 50S ribosomal protein L31; Function of strongly homologous gene; structure; Belongs to the bacterial ribosomal protein bL31 family. | 0.447 |
ACS40925.1 | rpoB | MexAM1_META1p3178 | MexAM1_META1p4405 | Putative transcriptional regulator, cold shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.417 |
ACS40925.1 | rpoZ | MexAM1_META1p3178 | MexAM1_META1p3409 | Putative transcriptional regulator, cold shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.431 |
ACS40925.1 | rpsE | MexAM1_META1p3178 | MexAM1_META1p2175 | Putative transcriptional regulator, cold shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 30S ribosomal subunit protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.412 |
ACS40925.1 | rpsL | MexAM1_META1p3178 | MexAM1_META1p2148 | Putative transcriptional regulator, cold shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 30S ribosomal subunit protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.473 |
ACS40926.1 | ACS40925.1 | MexAM1_META1p3179 | MexAM1_META1p3178 | Hypothetical protein; No homology to any previously reported sequences. | Putative transcriptional regulator, cold shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 0.495 |
rplO | ACS40925.1 | MexAM1_META1p2173 | MexAM1_META1p3178 | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | Putative transcriptional regulator, cold shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 0.424 |
rplO | rplS | MexAM1_META1p2173 | MexAM1_META1p5186 | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.971 |
rplO | rplT | MexAM1_META1p2173 | MexAM1_META1p1522 | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.976 |
rplO | rpmA | MexAM1_META1p2173 | MexAM1_META1p4855 | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 50S ribosomal protein L27; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL27 family. | 0.988 |
rplO | rpmE | MexAM1_META1p2173 | MexAM1_META1p2358 | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 50S ribosomal protein L31; Function of strongly homologous gene; structure; Belongs to the bacterial ribosomal protein bL31 family. | 0.862 |
rplO | rpoB | MexAM1_META1p2173 | MexAM1_META1p4405 | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.969 |
rplO | rpoZ | MexAM1_META1p2173 | MexAM1_META1p3409 | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.783 |
rplO | rpsE | MexAM1_META1p2173 | MexAM1_META1p2175 | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 30S ribosomal subunit protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.997 |
rplO | rpsL | MexAM1_META1p2173 | MexAM1_META1p2148 | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 30S ribosomal subunit protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.976 |