STRINGSTRING
ACS40961.1 ACS40961.1 ACS40962.1 ACS40962.1 bchD bchD ACS39990.1 ACS39990.1 ACS40102.1 ACS40102.1 ACS40964.1 ACS40964.1 ACS41102.1 ACS41102.1 ACS42325.1 ACS42325.1 rpsL rpsL ACS40695.1 ACS40695.1 crtB crtB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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ACS40961.1Putative tandem cold-shock DNA-binding domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (181 aa)    
Predicted Functional Partners:
ACS40962.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.798
bchD
Magnesium chelatase subunit BchD; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.793
ACS39990.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.608
ACS40102.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.556
ACS40964.1
Putative alpha/beta hydrolase, putative magnesium chelatase accessory protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.539
ACS41102.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.516
ACS42325.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.507
rpsL
30S ribosomal subunit protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
   
 
 0.473
ACS40695.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.473
crtB
Phytoene synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.463
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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